Nimble Science’s Post

Opportunity to log in and see the latest in the #SIMBACapsule data set from Nimble Science Senior Scientist, Bioinformatics and Data Cedoljub Bundalovic-Torma at the Microbiome Data Webinar (#MDW2024), hosted by The Microbiome Times. The talk will be on Oct 17 11:30 EST, "Spatially and Temporally Precise Sampling of the Small Intestine using SIMBA capsules in Observational and Interventional Studies for Multi-omics Datasets" Cedoljub Bundalovic-Torma will delve into: 💡 Discover how our innovative #SIMBACapsules excel in delivering high-quality #smallintestinal samples and enable comprehensive #multiomics analysis. 💡 Explore the potential applications of #SIMBACapsules in observational studies, as well as short-term and long-term interventions. 💡 Learn how to leverage our pilot study services and database to advance your #microbiome research. #Free Registration: Access a wealth of knowledge without any cost. #Event Details: Date: October 17th, 6am PT/ 9am ET/ 3pm CET (Nimble Science’s presentation starts @11:30 AM EST) #Registration: https://lnkd.in/ds4Kvbew Joseph Wang Sabina Bruehlmann #nutrition #Gihealth #nextgeneration #research #innovation #MDW2024

🌟 Unlocking Genetic Potential with Mosaic Biodata 🌟 At Mosaic Biodata, we're at the forefront of exploring and harnessing the power of genetic potential. Our advanced genomic solutions provide invaluable insights that empower individuals and healthcare professionals to understand and maximize the unique genetic blueprint of each person. Through comprehensive DNA analysis and personalized health recommendations, we enable: 🔬 Precision Medicine: Tailored treatments and preventive strategies based on individual genetic profiles. 🌿 Optimal Wellness: Personalized nutrition and lifestyle plans that align with your genetic predispositions. 🧬 Innovative Research: Cutting-edge studies that push the boundaries of what's possible in genetic science. Our mission is to translate complex genetic data into actionable insights that can improve health outcomes and enhance quality of life. By embracing our genetic potential, we open the door to a healthier, more vibrant future. Join us on this exciting journey of discovery and transformation. #GeneticPotential #PrecisionMedicine #Genomics #HealthcareInnovation #MosaicBiodata Daniel Stickler, M.D.

Through the collaboration, the companies aim to generate biological insights for GI health using multiomics data generated from small intestine samples.

🌟 Excited to share that I have completed the course: "Interpreting Genomic Variation: Overcoming Challenges in Diverse Populations" by Wellcome Connecting Science Learning and Training and FutureLearn 🌟 This course was an incredible journey that provided me with essential skills, tools, and concepts for genomic variant classification and interpretation, especially in the context of diverse populations and resource-limited settings. 💡 Key Learning Outcomes: * Mastered tools like DECIPHER for variant interpretation in clinical and biological contexts. * Gained insights into international guidelines for variant classification and dealing with uncertainty. * Analyzed real-world case studies to understand the complexities of genomic variation in underserved populations. I'm eager to apply these new skills to further advance my expertise in genomic research and contribute to the global efforts in precision medicine. #genomics #bioinformatics #precisionmedicine #geneticvariation #diversepopulations #lifelonglearning #wellcomeconnectingscience

"Thrilled to share a significant milestone – my first research paper on a prediction model for plant disease resistance proteins is published! 🌱✨ This work integrates computational methods with biological insights to understand better how plants defend against pathogens. I am grateful to my mentors and collaborators for their invaluable support. We are excited to contribute to advancements in plant health and resilience! 💡📄 [https://lnkd.in/g4ch3M-U] #FirstPaper #PlantScience #DiseaseResistance #Bioinformatics"

🔬 𝗘𝘅𝗰𝗶𝘁𝗶𝗻𝗴 𝗮𝗱𝘃𝗮𝗻𝗰𝗲𝗺𝗲𝗻𝘁𝘀 𝗶𝗻 𝗯𝗮𝗰𝘁𝗲𝗿𝗶𝗮𝗹 𝗽𝗮𝘁𝗵𝗼𝗴𝗲𝗻 𝘀𝘂𝗿𝘃𝗲𝗶𝗹𝗹𝗮𝗻𝗰𝗲! A recent study published in 𝘽𝙈𝘾 𝙂𝙚𝙣𝙤𝙢𝙞𝙘𝙨 (08 November 2024) explores the impact of genome assembly on bacterial typing from a 𝑶𝒏𝒆 𝑯𝒆𝒂𝒍𝒕𝒉 𝒑𝒆𝒓𝒔𝒑𝒆𝒄𝒕𝒊𝒗𝒆. The research highlights how different assembly tools and genome compositions can affect core genome MultiLocus Sequence Typing (#cgMLST) profiles, crucial for pathogen surveillance across human, animal, and plant health sectors. 🔑 𝗞𝗲𝘆 𝗳𝗶𝗻𝗱𝗶𝗻𝗴𝘀 𝗶𝗻𝗰𝗹𝘂𝗱𝗲:    Variability in cgMLST results is influenced by both the choice of assembly tools and the intrinsic genome composition.    High-quality sequencing data with sufficient depth (at least 75x) is essential for accurate cgMLST profiling.    The study emphasizes the need for harmonized bioinformatics pipelines to ensure reliable data sharing and outbreak investigation. This research underscores the importance of standardized practices in genomic surveillance to enhance data interoperability and improve public health responses. 📚 Read the full paper here: https://lnkd.in/eC-t4-3F 👉 Follow for more bioinformatics news at Independent Data Lab Compiled by: Hassiba Belahbib #genomics #bioinformatics #PathogenSurveillance #BacterialTyping #PublicHealth #ResearchInnovation #genomeassembly #b𝗮𝗰𝘁𝗲𝗿𝗶𝗮𝗹𝗽𝗮𝘁𝗵𝗼𝗴𝗲𝗻 #OneHealth #bacteria

🔬 Have you ever wondered how integrating different types of #biological #data can improve disease risk prediction? I recently co-authored a paper with Oscar Aguilar, Cheng Chang, and Dr. Manuel Rivas exploring this question. Our study creates an integrated model for disease risk assessment using multi-omics data (metabolomics, genomics, and demographic), comparing machine learning models like Lasso Regression and XG Boost. We found that while metabolomic data's contribution is marginal compared to demographic and genetic features, it can effectively replace the standard biomarker panel when unavailable. 🌟 We also developed a user-friendly online platform where people can input their data and instantly see their risk of developing various diseases. This makes the information directly accessible to patients, providing them with critical insights into their health risks. I would like to thank my co-authors for their dedicated work and Professors Kari Hanson and Madeleine Udell for their helpful guidance during our CME218 (Applied Data Science) class. 📹 You can find a link to our bioRxiv preprint and video presentation of our #research project in the comments!

Heading to #ASHG2024? Let's talk about how Almaden Genomics helps researchers unlock the full potential of their genomic data with flexible, cloud-native analysis solutions and expert-driven support. From managing high-volume multi-omics datasets to developing seamless workflows for RNA-seq, WGS, and beyond, our services are designed to keep your projects moving. Whether you need customized pipelines, clinical data integration, or advanced secondary and tertiary analysis options, we’ve got you covered. Our team partners with you to turn raw data into insights—faster and more efficiently. Let’s explore how we can streamline your research and accelerate discovery. Set up a meeting today: https://lnkd.in/ggm3yqkD #genomics #ASHG2024 #humanomics #bioinformatics #geneticsresearch

𝗛𝗲𝗮𝗹𝘁𝗵𝗰𝗮𝗿𝗲 𝗦𝘂𝗺𝗺𝗶𝘁 𝟮𝟬𝟮𝟱 : 𝗛𝗲𝗮𝗹𝘁𝗵𝗙𝘂𝘁𝘂𝗿𝗶𝘀𝘁 𝗗𝗶𝗮𝗹𝗼𝗴𝘂𝗲𝘀 - 𝗣𝗮𝗻𝗲𝗹 𝟳 𝗣𝗿𝗲𝗰𝗶𝘀𝗶𝗼𝗻 𝗛𝗲𝗮𝗹𝘁𝗵 𝗥𝗲𝘃𝗼𝗹𝘂𝘁𝗶𝗼𝗻: 𝗣𝗲𝗿𝘀𝗼𝗻𝗮𝗹𝗶𝘇𝗲𝗱 𝗠𝗲𝗱𝗶𝗰𝗶𝗻𝗲 𝗧𝗵𝗿𝗼𝘂𝗴𝗵 𝗚𝗲𝗻𝗼𝗺𝗶𝗰𝘀, 𝗠𝗶𝗰𝗿𝗼𝗯𝗶𝗼𝗺𝗲, 𝗮𝗻𝗱 𝗠𝗲𝘁𝗮𝗯𝗼𝗹𝗼𝗺𝗶𝗰𝘀 𝗖𝗿𝗶𝘁𝗲𝗿𝗶𝗮: • Expertise in genomics, microbiome research, or metabolomics with applications in personalized medicine. • Leadership or research role in organizations pioneering precision health solutions. • Proven ability to translate complex scientific concepts into actionable insights for healthcare professionals. • Experience in integrating personalized medicine into mainstream healthcare delivery. 𝗙𝗼𝗿𝗺𝗮𝘁: HealthFuturist Dialogues – Here 2 or 3 expert panel discuss the topic 3N format – What is New, Next and Noble on stage and followed by boardroom discussion taking deep-dive into the topic further Please visit here to apply: https://lnkd.in/g6xCT3ad #HealthcareSummit2025 #HealthcareInnovation #HealthcareLeadership #healthcareprofessionals #NetworkingOpportunities #healthcare #healthcarespecialist #HealthcareConference #genomics #MicrobiomeResearch #PersonalisedMedicine #PrecisionHealth #HealthcareRevolution #hcs2025