Abstract is missing.
- Asynchronous Pattern MatchingAmihood Amir. 1-10 [doi]
- SNP and Haplotype Analysis - Algorithms and ApplicationsEran Halperin. 11-11 [doi]
- Identifying Co-referential Names Across Large CorporaLevon Lloyd, Andrew Mehler, Steven Skiena. 12-23 [doi]
- Adaptive Searching in Succinctly Encoded Binary Relations and Tree-Structured DocumentsJérémy Barbay, Alexander Golynski, J. Ian Munro, S. Srinivasa Rao. 24-35 [doi]
- Theoretical and Practical Improvements on the RMQ-Problem, with Applications to LCA and LCEJohannes Fischer, Volker Heun. 36-48 [doi]
- A Linear Size Index for Approximate Pattern MatchingHo-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong. 49-59 [doi]
- On-Line Linear-Time Construction of Word Suffix TreesShunsuke Inenaga, Masayuki Takeda. 60-71 [doi]
- Obtaining Provably Good Performance from Suffix Trees in Secondary StoragePang Ko, Srinivas Aluru. 72-83 [doi]
- Geometric Suffix Tree: A New Index Structure for Protein 3-D StructuresTetsuo Shibuya. 84-93 [doi]
- New Bounds for Motif Finding in Strong InstancesBrona Brejová, Daniel G. Brown, Ian M. Harrower, Tomás Vinar. 94-105 [doi]
- Fingerprint Clustering with Bounded Number of Missing ValuesPaola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Giancarlo Mauri. 106-116 [doi]
- Tiling an Interval of the Discrete LineOlivier Bodini, Eric Rivals. 117-128 [doi]
- Common Substrings in Random StringsEric Blais, Mathieu Blanchette. 129-140 [doi]
- On the Repeat-Annotated Phylogenetic Tree Reconstruction ProblemFiras Swidan, Michal Ziv-Ukelson, Ron Y. Pinter. 141-152 [doi]
- Subsequence Combinatorics and Applications to Microarray Production, DNA Sequencing and Chaining AlgorithmsSven Rahmann. 153-164 [doi]
- Solving the Maximum Agreement SubTree and the Maximum Compatible Tree Problems on Many Bounded Degree TreesSylvain Guillemot, François Nicolas. 165-176 [doi]
- An Improved Algorithm for the Macro-evolutionary Phylogeny ProblemBehshad Behzadi, Martin Vingron. 177-187 [doi]
- Property Matching and Weighted MatchingAmihood Amir, Eran Chencinski, Costas S. Iliopoulos, Tsvi Kopelowitz, Hui Zhang. 188-199 [doi]
- Faster Two Dimensional Scaled MatchingAmihood Amir, Eran Chencinski. 200-210 [doi]
- Approximation of RNA Multiple Structural AlignmentMarcin Kubica, Romeo Rizzi, Stéphane Vialette, Tomasz Walen. 211-222 [doi]
- Finding Common RNA Pseudoknot Structures in Polynomial TimePatricia A. Evans. 223-232 [doi]
- A Compact Mathematical Programming Formulation for DNA Motif FindingCarl Kingsford, Elena Zaslavsky, Mona Singh. 233-245 [doi]
- Local Alignment of RNA Sequences with Arbitrary Scoring SchemesRolf Backofen, Danny Hermelin, Gad M. Landau, Oren Weimann. 246-257 [doi]
- An O(n:::3/2:::sqrt(log n)) Algorithm for Sorting by Reciprocal TranslocationsMichal Ozery-Flato, Ron Shamir. 258-269 [doi]
- Longest Common Subsequences in Permutations and Maximum Cliques in Circle GraphsAlexandre Tiskin. 270-281 [doi]
- A Simpler Analysis of Burrows-Wheeler Based CompressionHaim Kaplan, Shir Landau, Elad Verbin. 282-293 [doi]
- Statistical Encoding of Succinct Data StructuresRodrigo González, Gonzalo Navarro. 294-305 [doi]
- Dynamic Entropy-Compressed Sequences and Full-Text IndexesVeli Mäkinen, Gonzalo Navarro. 306-317 [doi]
- Reducing the Space Requirement of LZ-IndexDiego Arroyuelo, Gonzalo Navarro, Kunihiko Sadakane. 318-329 [doi]
- Faster Algorithms for Computing Longest Common Increasing SubsequencesGerth Stølting Brodal, Kanela Kaligosi, Irit Katriel, Martin Kutz. 330-341 [doi]
- New Algorithms for Text FingerprintingRoman Kolpakov, Mathieu Raffinot. 342-353 [doi]
- Sublinear Algorithms for Parameterized MatchingLeena Salmela, Jorma Tarhio. 354-364 [doi]
- Approximate Matching in Weighted SequencesAmihood Amir, Costas S. Iliopoulos, Oren Kapah, Ely Porat. 365-376 [doi]
- Algorithms for Finding a Most Similar SubforestJesper Jansson, Zeshan Peng. 377-388 [doi]
- Efficient Algorithms for Regular Expression Constrained Sequence AlignmentYun Sheng Chung, Chin Lung Lu, Chuan Yi Tang. 389-400 [doi]
- Large Scale Matching for Position Weight MatricesAude Liefooghe, Hélène Touzet, Jean-Stéphane Varré. 401-412 [doi]