Table of Contents

• Accelerating our understanding of supernova explosion mechanism via simulations and visualizations with GenASiSReuben D. Budiardja, Christian Y. Cardall, Eirik Endeve. 1 [doi]
• Paleoscape model of coastal South Africa during modern human origins: progress in scaling and coupling climate, vegetation, and agent-based models on XSEDEEric Shook, Colin Wren, Curtis W. Marean, Alastair J. Potts, Janet Franklin, Francois Engelbrecht, David O'Neal, Marco Janssen, Erich Fisher, Kim Hill, Karen J. Esler, Richard M. Cowling, Simon Scheiter, Glenn Moncrieff. 2 [doi]
• Cyberinfrastructure resources enabling creation of the loblolly pine reference transcriptomeLe-Shin Wu, Carrie L. Ganote, Thomas G. Doak, William K. Barnett, Keithanne Mockaitis, Craig A. Stewart. 3 [doi]
• NCBI-BLAST programs optimization on XSEDE resources for sustainable aquacultureArun Seetharam, Antonio Gomez, Catherine M. Purcell, John R. Hyde, Philip D. Blood, Andrew J. Severin. 4 [doi]
• FlowGate: towards extensible and scalable web-based flow cytometry data analysisYu Qian, Hyunsoo Kim, Shweta Purawat, Jianwu Wang, Rick Stanton, Alexandra Lee, Weijia Xu, Ilkay Altintas, Robert S. Sinkovits, Richard H. Scheuermann. 5 [doi]
• A scalable computational approach to political redistricting optimizationYan Y. Liu, Wendy K. Tam Cho, Shaowen Wang. 6 [doi]
• Discovering the influence of socioeconomic factors on online game behaviorsMin Zhan, Y. Dora Cai, Dahai Guo. 7 [doi]
• Performance examinations of multiple time-stepping algorithms on stampede supercomputerNa Zhang, Peng Zhang, Li Zhang, Xiao Zhu, Lei Huang, Yuefan Deng. 8 [doi]
• Performance assessment of real-time estimation of continuous-time stochastic volatility of financial data on GPUsDaniel Krulewich, Junqi Yin, Brent H. Bundick, Yong Zeng. 9 [doi]
• Grouping game players using parallelized k-means on supercomputersY. Dora Cai, Rabindra Robby Ratan, Cuihua Shen, Jay Alameda. 10 [doi]
• The VAT: enhanced video analysisVirginia Kuhn, Alan B. Craig, Michael Simeone, Sandeep Puthanveetil Satheesan, Luigi Marini. 11 [doi]
• Inversion of magnetotelluric data using integral equation approach with variable sensitivity domain: application to earthscope MT dataMartin Cuma, Alexander V. Gribenko, Michael S. Zhdanov. 12 [doi]
• SIMD tabu search implementation for solving the quadratic assignment problem with GPU accelerationClara Novoa, Apan Qasem, Abhilash Chaparala. 13 [doi]
• Using Mozilla badges to certify XSEDE users and promote trainingSandra Kappes, Vincent C. Betro. 14 [doi]
• Extending access to HPC skills through a blended online courseSteven I. Gordon, James Demmel, Lizanne DeStefano, Lorna Rivera. 15 [doi]
• Connecting the non-traditional user-community to the national CyberInfrastructureRitu Arora, Jessica Trelogan. 16 [doi]
• ISLET: an isolated, scalable, & lightweight environment for trainingJonathan Schipp, Jeannette Dopheide, Adam J. Slagell. 17 [doi]
• Science gateways for humanities, arts, and social scienceAlan B. Craig. 18 [doi]
• On fostering a culture of research cyberinfrastructure grant proposals within a community of service providers in an EPSCoR stateHenry Neeman, Kate Adams, Joshua Alexander, Dana Brunson, S. Patrick Calhoun, James Deaton, Franklin Fondjo Fotou, Karl Frinkle, Zane Gray, Evan Lemley, George Louthan, Greg Monaco, Mike Morris, Joel Snow, Brett Zimmerman. 19 [doi]
• Incorporating interactive compute environments into web-based training materials using the Cornell job runner serviceSusan Mehringer, Aaron Birkland. 20 [doi]
• TAS view of XSEDE users and usageRobert L. DeLeon, Thomas R. Furlani, Steven M. Gallo, Joseph P. White, Matthew D. Jones, Abani K. Patra, Martins Innus, Thomas Yearke, Jeffrey T. Palmer, Jeanette M. Sperhac, Ryan Rathsam, Nikolay Simakov, Gregor von Laszewski, Fugang Wang. 21 [doi]
• Multidisciplinary research and education with open tools: metagenomic analysis of 16S rRNA using Arduino, Android, Mothur and XSEDEKristin Muterspaw, Tara Urner, Ruth Lewis, Ivan Babic, Deeksha Srinath, Charles Peck. 22 [doi]
• XSEDE value added, cost avoidance, and return on investmentCraig A. Stewart, Ralph Roskies, Richard Knepper, Richard Lee Moore, Justin Whitt, Timothy Cockerill. 23 [doi]
• Overview of XSEDE-PRACE collaborative projects in 2014Tabitha K. Samuel, Shunzhou Wan, Peter V. Coveney, Morris Riedel, M. Shahbaz Memon, Sandra Gesing, Nancy Wilkins-Diehr. 24 [doi]
• Publishing and consuming GLUE v2.0 resource information in XSEDEWarren Smith, Sudhakar Pamidighantam, John-Paul Navarro. 25 [doi]
• Market-based on demand scheduling (MBoDS) in co-operative grid environmentMd Anindya Prodhan, Andrew Grimshaw. 26 [doi]
• A prototype sampling interface for PAPIIvonne López, Shirley Moore, Vincent M. Weaver. 27 [doi]
• Optimizing codes on the Xeon Phi: a case-study with LAMMPSAdam Jundt, Ananta Tiwari, William A. Ward Jr., Roy L. Campbell, Laura Carrington. 28 [doi]
• Jetstream: a self-provisioned, scalable science and engineering cloud environmentCraig A. Stewart, Timothy M. Cockerill, Ian T. Foster, David Y. Hancock, Nirav Merchant, Edwin Skidmore, Daniel Stanzione, James Taylor, Steven Tuecke, George W. Turner, Matthew Vaughn, Niall I. Gaffney. 29 [doi]
• Bridges: a uniquely flexible HPC resource for new communities and data analyticsNicholas A. Nystrom, Michael J. Levine, Ralph Z. Roskies, J. Ray Scott. 30 [doi]
• Using data science to understand tape-based archive workloadsBill Anderson, Marc Genty, David L. Hart, Erich Thanhardt. 31 [doi]
• Storage utilization in the long tail of scienceGlenn K. Lockwood, Mahidhar Tatineni, Rick Wagner. 32 [doi]
• Advanced user environment design and implementation on integrated multi-architecture supercomputersRory C. Kelly, Si Liu, Siddhartha S. Ghosh, Davide Del Vento, David L. Hart, Dan Nagle, B. J. Smith, Richard A. Valent. 33 [doi]
• Integrating apache spark into PBS-Based HPC environmentsTroy Baer, Paul Peltz Jr., Junqi Yin, Edmon Begoli. 34 [doi]
• In-core volume rendering for Cartesian grid fluid dynamics simulationsTed Wetherbee, Elizabeth Jones, Michael R. Knox, Stou Sandalski, Paul R. Woodward. 35 [doi]
• Bring the NLACE model online using XSEDE and HUBzeroChristopher S. Thompson, Lan Zhao, Steven M. Clark, Paul E. Barbone, Assad Oberai, Carol X. Song, D. Thomas Seidl, Tengxiao Liu. 36 [doi]
• GeoHashViz: interactive analytics for mapping spatiotemporal diffusion of Twitter hashtagsKiumars Soltani, Aditya Parameswaran, Shaowen Wang. 37 [doi]
• Autotuning OpenACC work distribution via direct searchCalvin Montgomery, Jeffrey L. Overbey, Xuechao Li. 38 [doi]
• The CIPRES workbench: a flexible framework for creating science gatewaysMark A. Miller, Terri Schwartz, Paul Hoover, Kenneth Yoshimoto, Subhashini Sivagnanam, Amit Majumdar. 39 [doi]
• Porting scientific libraries to PGAS in XSEDE resources: practice and experienceAntonio Gómez-Iglesias, Dmitry Pekurovsky, Khaled Hamidouche, Jie Zhang, Jérôme Vienne. 40 [doi]
• Enabling HPC simulation workflows for complex industrial flow problemsCameron W. Smith, Steven Tran, Onkar Sahni, Farhad Behafarid, Mark S. Shephard, Raminderjeet Singh. 41 [doi]
• A performance predictor for UltraScan supercomputer calculationsHaram Kim, Emre H. Brookes, Borries Demeler. 42 [doi]
• CDD: computational discovery desktopVictor M. Anisimov, Michael J. Hallock, Taras V. Pogorelov. 43 [doi]
• Leveraging DiaGrid hub for interactively generating and running parallel programsRitu Arora, Kevin Chen, Madhav Gupta, Steven M. Clark, Carol X. Song. 44 [doi]