Happy holidays from the MOLGENIS team! 🎄✨ A big thank you to all our partners and users for a great 2024. We appreciate your collaboration this year! We’ll be slowing down for the holidays but look forward to working with you again in the new year. Here’s to a fantastic 2025! 🌟
MOLGENIS
Data Infrastructure and Analytics
MOLGENIS: a data platform for researchers to accelerate scientific collaborations.
About us
FAIR open source software for research data
- Website
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molgenis.org
External link for MOLGENIS
- Industry
- Data Infrastructure and Analytics
- Company size
- 11-50 employees
- Type
- Nonprofit
- Founded
- 2001
Employees at MOLGENIS
Updates
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MOLGENIS reposted this
𝗦𝗮𝘃𝗲 𝘁𝗵𝗲 𝗗𝗮𝘁𝗲! 𝟮𝟬𝟮𝟲 𝗗𝗮𝘁𝗮𝗦𝗛𝗜𝗘𝗟𝗗 𝗖𝗼𝗻𝗳𝗲𝗿𝗲𝗻𝗰𝗲 We are excited to announce the 2025 DataSHIELD Conference, hosted by SIB Swiss Institute of Bioinformatics, taking place from 23–26 September 2025 at the University of Lausanne, Switzerland. The conference will feature an engaging programme including beginner and advanced training workshops, talks, demonstrations, and discussions about the development and use of the DataSHIELD software. Mark your calendars and stay tuned—abstract submissions open in early March 2025, along with further details about the venue and programme. We look forward to welcoming you to Lausanne! -RW #DatasHIELD #SIB #Lausanne #Conference #FederatedAnalytics #AutomatedSDC #OpenSource #SaveTheDate
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🌍 Connecting and Collaborating in Rare Diseases 🌍 Together with UMCG Genetics colleague Marrit Hitzert, we had the pleasure of attending the ERN ITHACA board meeting at a beautiful location in Bucharest. ERN ITHACA is a European Reference Network dedicated to bringing together clinical expertise and advancing knowledge for patients with Rare Malformation Syndromes, Intellectual, and Other Neurodevelopmental Disorders. As part of this initiative, we developed the ILIAD Rare Diseases patient registry. During the meeting, Marije van der Geest presented the latest updates on this registry. A big shoutout to the Romanian team for their hospitality and excellent organization! 🇷🇴 #RareDiseases #ERNITHACA #PatientRegistry
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ERN registries are repositories for health data on rare diseases, supporting advancements in care and research. We’re pleased to share that the ERN GENTURIS Registry is built using the MOLGENIS software!
#ERNregistries #Registries are a very important part of the work done by ERNs. Any #research on rare diseases can only take place if data is available and registries are the key as repositories of health data. Check the videos why ERN registries are important for rare disease research: 👉 English spoken version, including subtitles: https://lnkd.in/dASd8c8G 👉 French spoken version, including subtitles: https://lnkd.in/dtqdhwrG 👉 Dutch spoken version, including subtitles: https://lnkd.in/dWZnb3wd 👉 Find our more about ERN GENTURIS registry: https://lnkd.in/dVj8pYUH #healthdata #ehealth #ehds #raredisease #rarediseasedata #research #registry #data #healthtransformation
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Very proud of our newest PhD, Dr. Alexander Kellmann! 👏 This morning, Alexander successfully defended his thesis titled “Accelerating Health Research Using Linked Data and Virtual Reality”, supervised by Morris Swertz, Esther van Enckevort and Joeri van der Velde. Congratulations!
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New publication out now! 🎉 We introduce MOLGENIS Armadillo, a lightweight server designed to facilitate federated analysis using frameworks like DataSHIELD. The paper highlights how federated analysis enables combining data from cohorts, biobanks, and registries without sharing sensitive individual-level data—solving challenges related to privacy, ethics, and scalability in collaborative health research. MOLGENIS Armadillo makes this approach accessible and user-friendly for data owners. Read the full paper here: https://lnkd.in/efT-tePy #FederatedAnalysis #Bioinformatics #HealthResearch
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MOLGENIS reposted this
Our project has eight key exploitable results - otherwise known as mega deliverables! One of these is a Metadata Catalogue. The work to deliver this aimed to integrate and enrich a catalogue of datasets in a findable, accessible, interoperable and reusable (FAIR) data infrastructure to enable rapid and efficient #data discovery. Find out more in this blog. https://lnkd.in/ernwiNNp This work has been led by UMCG's Morris Swertz who will discuss the European Health Research Data and Sample Catalogue at tomorrow's #EHEN Stakeholder Event in Brussels, on behalf of the LongITools Project and ATHLETE Research Project. MOLGENIS, Eleanor Hyde, Marije van der Geest, Sylvain Sebert, Teija Juola, European Health and Digital Executive Agency (HaDEA)
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👩💻 How do you find the right human #data or biological #samples for your #research? And how do you decide whether the collection you found is worth using? Or even worth reaching out for? 👩🔬 Connecting researchers with samples and data and accelerating #FAIR research, that is what MOLGENIS (UMCG) is all about! We’ve set up a short 5-minute survey to find out how researchers find the samples and data they need. Are you a researcher in the field of #medical or #biomedical research and do you have trouble finding the right data and sample collections? 💡 Click the link below, complete the survey before December 19th and help us improve our catalogue services for the research community. It would mean a great deal to us! https://lnkd.in/e-MJDVnA #FAIRdata #Lifesciences #biobanking UMCG Cohort and Biobank Coordination Hub LongITools Project ATHLETE Research Project DataSHIELD
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Yesterday, we had the pleasure of attending the Health-RI Knooppunten Dag in Nijmegen together with the UMCG Cohort and Biobank Coordination Hub and Datapoort! This event is always an excellent opportunity to connect with other partners and share plans for making health data more #FAIR #HealthRI #DataAccessibility #Collaboration
Pods, posters, films en workshops. Genoeg te doen deze middag tijdens de Health-RI #Knooppuntendag die nu vol aan de gang is! 💻 Op het data experience plein wordt in een pod online ervaren welke trainingen, tools en services het Gezondheidsdata Portaal nu al heeft. En in de meta data Catalogus kan worden gezocht in de beschikbare datasets. De posters geven een prachtig overzicht van wat er allemaal al is in de #Knooppunten en waaraan wordt gewerkt in de verschillende knooppunt werkgroepen. 📽️ De films en animaties van gegevensverbeterenlevens https://lnkd.in/ec7h9JuM, de Knooppuntbezoeken en het Health-RI narratief https://lnkd.in/ebn-UEXg draaien continue op groot scherm. 👷 En tijdens de drie workshops over 'pseudonimisatie en koppelen', 'onboarden datasets' en 'datatoegang en autorisatie' worden de challenges en de samenhang tussen de verschillende functionaliteiten van de infrastructuur aangepakt. ⁉️ Key take aways en challenges? De infrastructuur wordt nu al in gezamenlijkheid gerealiseerd, maar er is nog veel werk aan de winkel. Daarbij is een integrale aanpak en kijk op wat er nodig is voor secundair data gebruik essentieel. Health-RI helpt daarbij. Standaardisatie, requirements voor SPE's, uitbreiding van de huidige core meta data set naar (EU en NL) Health-DCAT, data extractie van EPD's gemapt op OMOP, communicatie richting datahouders, data gebruikers, burgers en patiënten, aansluiting en afspraken op regionaal en nationaal niveau en geïntegreerde wet- en regelgeving bijv. in de vorm van de uEHDS; om maar een paar challenges te noemen. 🛣️ We zijn er nog niet, maar wel op de goede weg. Foto's gemaakt door Thijs Rooimans
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Kick-off is live for ERDERA today, with MOLGENIS joining on the mission to deliver better prevention, better diagnosis, better treatment to the over 30 million people living with a rare disease in Europe! 🥳 See https://lnkd.in/etYDBiSZ
ERDERA opens a new era for rare disease research in Europe and beyond! 🚀 👩🏽🔬Backed by the European Union, over 170 organizations are uniting to make Europe a leader in rare disease research and innovation. At MOLGENIS, we're proud to partner with the European Rare Disease Research Alliance (ERDERA)! 🌍💙 Read ERDERA’s press release to learn more 🗞️https://bit.ly/3zgaZA0 Visit our website🌐 erdera.org #ERDERA #RareDiseases #ResearchInnovation #HealthInnovation UMCG Genetics